1. Yan, Q*., Li, S*., Yan, Q*., Huo, X*., Wang, C#., Wang, X., Sun, Y., Zhao, W., Yu, Z., Zhang, Y., Guo, R., Lv, Q., He X., Yao, C., Li Z., Chen F., Ji Q., Zhang A., Jin H., Wang G., Feng X., Feng L., Wu F., Ning J., Deng S., An Y., Guo D#., Martin Francis#., Ma, X#. (2024). A genomic compendium of cultivated human gut fungi characterizes the gut mycobiome and its relevance to common diseases. Cell, 187(12), 2969-2989. (IF2023=45)
2. Huang L*, Guo R*, Li S*#, Wu X, Zhang Y, Guo S, Lv Y, Xiao Z, Kang J, Meng J, Zhou P, Ma J, You W, Zhang Y, Yu H, Zhao J, Huang G, Duan Z, Yan Q#, Sun W#. A multi-kingdom collection of 33,804 reference genomes for the human vaginal microbiome. Nat Microbiol. 2024 Jun 21. doi: 10.1038/s41564-024-01751-5. Epub ahead of print. PMID: 38907008. (IF2023=20.5)
3. Tian, Xiangge*, Li, Shenghui*, Wang, Chao*, Zhang, Yanyan, Feng, Xiaoying, Yan, Qiulong#, Guo, Ruochun, Wu, Fan, Wu, Chunxue, Wang, Yan, Huo, Xiaokui#, Ma, Xiaochi#. (2024). Gut virome-wide association analysis identifies cross-population viral signatures for inflammatory bowel disease. Microbiome, 12(1), 130. (IF2023=13.8)
4. Sun, W., Zhang, Y., Guo, R., Sha, S., Chen, C., Ullah, H., ... & Yan, Q#. (2024). A population-scale analysis of 36 gut microbiome studies reveals universal species signatures for common diseases. npj Biofilms and Microbiomes, 10(1), 96. (IF2023=7.8)
5. Zhang, P., Guo, R., Ma, S., Jiang, H., Yan, Q. #, Li, S., ... & Shi, H#. (2025). A metagenome-wide study of the gut virome in chronic kidney disease. Theranostics, 15(5), 1642. (IF2023=12.4)
6. Yan, Q., Huang, L., Li, S., Zhang, Y., Guo, R., Zhang, P., ... & Sun, W. The Chinese gut virus catalogue reveals gut virome diversity and disease-related viral signatures. Genome Medicine, (2025).17(1), 30. (IF2023=10.4)